STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UGN0Paired amphipathic helix protein. (465 aa)    
Predicted Functional Partners:
A0A072UCY2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.520
A0A072V336
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.520
G7J4T3_MEDTR
Histone deacetylase superfamily protein.
   
 0.520
G7J4T5_MEDTR
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.520
G7JKX4_MEDTR
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.520
G7I511_MEDTR
Lysine-specific demethylase ELF6-like protein, putative.
   
 
 0.516
A0A072TYE9
Transmembrane protein, putative.
   
 
 0.463
A0A072UR24
Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family.
    
 0.463
A0A072V241
Putative chromatin remodeling & transcriptional activation CHROMO-DOMAIN family.
    
 0.463
A0A072VPV4
Homeobox KN domain protein.
   
 
 0.463
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.