STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UIS6(E)-beta-ocimene/myrcene synthase. (580 aa)    
Predicted Functional Partners:
G7IQ36_MEDTR
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.935
A0A072UPA9
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.905
GGPPS
Putative geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.905
G7K3I3_MEDTR
Putative geranylgeranyl diphosphate synthase.
     
 0.905
G7KC50_MEDTR
Putative geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.905
A0A072UL00
4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
     
 0.900
A0A072UM06
Putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
     
 0.900
G7KRI7_MEDTR
Putative isopentenyl-diphosphate Delta-isomerase.
     
  0.900
G8A1H8_MEDTR
Putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase.
     
 0.900
A0A072TWE7
Adenylate isopentenyltransferase.
     
  0.800
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.