STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UIX2Putative O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase. (476 aa)    
Predicted Functional Partners:
Q2HU21_MEDTR
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.680
Q2MGQ5_MEDTR
RPB3 DNA-directed RNA polymerase II subunit 3.
    
  0.665
G7J900_MEDTR
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.641
G7KI14_MEDTR
DNA-directed RNA polymerase I, II; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.637
I3SRI9_MEDTR
DNA-directed RNA polymerase I, II; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.637
G7LF25_MEDTR
RNA polymerase II, Rpb4, core protein.
    
  0.622
MTR_1313s0020
Allophanate hydrolase subunit 2.
    
 0.597
G7IDL5_MEDTR
Methylcrotonoyl-CoA carboxylase subunit alpha.
    
 0.597
G7LIV6_MEDTR
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.597
A0A072U4U6
DNA-directed RNA polymerase II subunit RPB11-like protein.
    
  0.549
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.