Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UJ68NB-ARC domain protein. (991 aa)    
Predicted Functional Partners:
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
   
 0.668
G7KNY7_MEDTR
Putative cGMP-dependent protein kinase AGC-PKA-PKG family.
   
 0.574
A0A072V9X4
Putative tetratricopeptide-like helical domain, thioredoxin-like protein.
    
 0.476
G8A1T1_MEDTR
Uncharacterized protein.
  
 
  0.451
G7JYH5_MEDTR
BTB/POZ domain plant protein.
    
 0.408
G7JV46_MEDTR
Beta-tubulin, putative.
   
 0.405
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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