STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072ULT3Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (698 aa)    
Predicted Functional Partners:
G7LGP3_MEDTR
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
 
 0.642
G7IHZ1_MEDTR
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
 
 
 0.634
G7JIA0_MEDTR
Expansin A2.
  
     0.534
G7KEP0_MEDTR
OBERON-like protein; Probable transcription factor.
  
     0.534
G7KG53_MEDTR
AT hook motif DNA-binding family protein.
  
 
   0.532
A0A072TUV2
Methyltransferase.
  
     0.530
A0A072VKG9
Methyltransferase.
  
     0.525
A0A072VKW8
Uncharacterized protein.
  
     0.525
G7L8K7_MEDTR
Uncharacterized protein.
  
     0.525
A0A072V164
Stearoyl-acyl-carrier desaturase.
  
     0.524
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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