STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UM09Putative transcription factor WD40-like family. (757 aa)    
Predicted Functional Partners:
G8A181_MEDTR
Putative nuclear pore localization protein NPL4.
   
 
 0.971
A0A072UH43
OTU-like cysteine protease.
    
 
 0.965
I3T3U9_MEDTR
Putative SEP domain-containing protein.
    
 
 0.952
Q9AXJ7_MEDTR
UBA and UBX domain plant protein.
    
 
 0.952
G7JUU5_MEDTR
Ubiquitin fusion degradation 1 protein.
   
 
 0.918
G7JUU9_MEDTR
Ubiquitin fusion degradation 1 protein.
   
 
 0.918
G7JUV2_MEDTR
Ubiquitin fusion degradation 1 protein.
   
 
 0.918
G7KCM5_MEDTR
Ubiquitin fusion degradation protein (UFD1), putative.
   
 
 0.918
G7LAK8_MEDTR
Putative ubiquitin fusion degradation protein UFD1.
   
 
 0.918
A0A072TZJ6
Ara4-interacting protein.
   
 
 0.913
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.