STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UPJ3Putative tRNA (Guanosine(18)-2'-O)-methyltransferase. (1837 aa)    
Predicted Functional Partners:
G7JC26_MEDTR
Ribosome silencing factor.
   
 
 0.889
G7K3V1_MEDTR
Putative ribosomal protein L29.
   
 
 0.885
G7L1T8_MEDTR
tRNA pseudouridine synthase.
   
 
 0.878
A0A072UQ77
Putative transcription factor WD40-like family.
   
  
 0.874
G7L937_MEDTR
Ribosomal protein L51/S25/CI-B8 domain protein.
    
   0.852
A0A072UCU5
Transducin/WD40 repeat protein.
   
    0.838
G7K8G8_MEDTR
U3 small nucleolar RNA-associated protein.
  
    0.803
A0A072UXP5
Putative nucleolar pre-ribosomal-associated protein.
  
    0.793
A0A072VUK4
Putative suppressor of forked, tetratricopeptide-like helical domain, RNA-binding domain, S1.
  
   0.746
G7JA04_MEDTR
S1 RNA-binding domain protein.
  
   0.746
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.