STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UQL0Putative response regulator and transcription factor RR-A-type family. (585 aa)    
Predicted Functional Partners:
G7IBU3_MEDTR
Gigantea protein 1B.
    
 0.984
G7IG65_MEDTR
Putative SRCR domain, F-box domain, potassium channel, voltage-dependent, EAG.
    
 0.962
G7IBF3_MEDTR
Putative transcription factor TCP family.
    
 0.931
G7IE92_MEDTR
Putative transcription factor TCP family.
    
 0.931
A0A072V5J5
Putative response regulator and transcription factor RR-A-type family.
  
  
 
0.901
A0A072VMD0
Cryptochrome 2B apoprotein.
   
  
 0.744
G7I4R1_MEDTR
Putative deoxyribodipyrimidine photo-lyase.
   
  
 0.744
G7LBF6_MEDTR
Putative F-box domain, galactose oxidase/kelch, beta-propeller, kelch-type beta propeller.
   
 
 0.658
F8T7T4_MEDTR
Flowering locus protein T.
      
 0.616
G7L558_MEDTR
Putative transcription factor MYB-HB-like family.
    
 0.609
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.