STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072URA8PPR containing plant protein. (686 aa)    
Predicted Functional Partners:
A0A072V4P2
Putative transcription factor WD40-like family.
    
 0.873
A0A072TQG7
Uncharacterized protein.
    
 0.697
G7JF02_MEDTR
Putative non-specific serine/threonine protein kinase; Belongs to the PI3/PI4-kinase family.
    
 0.697
G7K0Z4_MEDTR
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.697
G7K3W5_MEDTR
Putative molybdate-anion transporter, major facilitator superfamily domain-containing protein.
    
 0.697
A0A072UZD8
Putative cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family.
      
 0.583
A7UQU4_MEDTR
Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase.
    
 0.518
A8IK57_MEDTR
Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase.
    
 0.518
B2MVQ1_MEDTR
Putative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase.
    
 0.518
B6CHW8_MEDTR
Rho-like GTP-binding protein.
    
 0.518
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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