STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UY64NAD(P)-binding rossmann-fold protein. (275 aa)    
Predicted Functional Partners:
MTR_0003s0530
Putative strictosidine synthase transcription factor WD40-like family.
      
 0.689
G7IQK6_MEDTR
Strictosidine synthase.
      
 0.689
G7IQL0_MEDTR
Strictosidine synthase.
      
 0.689
G7JT54_MEDTR
Strictosidine synthase.
      
 0.689
I3SNT9_MEDTR
Putative 6-beta-hydroxyhyoscyamine epoxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.687
G7JBM5_MEDTR
Putative 1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 0.639
dxs2-2
Putative 1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 0.625
G7IFK9_MEDTR
Putative 1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 0.625
G7JJ14_MEDTR
Putative 1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 0.625
dxs2
Putative 1-deoxy-D-xylulose-5-phosphate synthase.
  
  
 0.623
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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