Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A072UYA6Serine/Threonine-kinase DDB-G0267514-like protein, putative. (588 aa)    
Predicted Functional Partners:
A0A072V3E2
RING-type E3 ubiquitin transferase.
    
 
 0.523
A0A072UPL7
PB1-Joka2 domain protein.
   
  0.501
A0A072UPY6
Putative PB1 domain-containing protein.
   
  0.501
A0A072UPZ4
PB1 domain protein.
   
  0.501
A0A072UQZ7
PB1 domain protein.
   
  0.501
A0A072UR03
PB1-Joka2 domain protein.
   
  0.501
A0A072URU5
PB1 domain protein.
   
  0.501
A0A072V0X9
Ubiquitin-associated/TS-N domain protein, putative.
   
  0.501
A0A072V0Y5
PB1 domain protein.
   
  0.501
G7L1B6_MEDTR
DUF3685 family protein.
     
 0.500
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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