STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072UZB1Lipase; Belongs to the AB hydrolase superfamily. Lipase family. (406 aa)    
Predicted Functional Partners:
A0A072UME9
Delta(24)-sterol reductase-like protein.
     
 0.901
A0A072UFJ5
7-dehydrocholesterol reductase-like protein.
    
 0.651
A0A072UNF1
7-dehydrocholesterol reductase-like protein.
    
 0.651
A0A072UZQ8
7-dehydrocholesterol reductase-like protein.
    
 0.651
G7LCR6_MEDTR
AMP-dependent synthetase and ligase family protein.
    
 0.525
MTR_1758s0010
Acetate CoA-transferase YdiF.
  
 
 0.462
B7FFE3_MEDTR
Isochorismatase hydrolase family protein.
  
 0.458
G7JFV6_MEDTR
Nitroreductase family protein.
  
 
 0.413
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.