STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072V076ATP-binding protein, putative. (628 aa)    
Predicted Functional Partners:
A0A072TV87
Uncharacterized protein.
  
  0.481
A0A072UY32
Ribosomal protein S21 family protein.
  
     0.450
A0A072TRG6
E3 ubiquitin-protein ligase BRE1-like protein.
  
 
   0.441
A0A072ULJ7
Putative concanavalin A-like lectin/glucanase domain-containing protein; Belongs to the leguminous lectin family.
  
     0.416
A2Q4E4_MEDTR
Uncharacterized protein.
  
     0.412
G7KJY8_MEDTR
DUF247 domain protein.
  
     0.412
G7JNM4_MEDTR
Uncharacterized protein.
  
     0.405
G7IQ63_MEDTR
Putative chromatin remodeling & transcription regulator ABTB family.
  
  0.402
G7J9Q6_MEDTR
Transmembrane protein, putative.
  
 
  0.402
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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