STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072V162DUF1645 family protein. (209 aa)    
Predicted Functional Partners:
G7K1D1_MEDTR
DUF1645 family protein.
  
  
0.589
G7I9G3_MEDTR
DUF1645 family protein.
      
 0.556
G7I4T0_MEDTR
Embryo sac development arrest protein.
  
     0.535
A0A072U9W8
PPR repeat protein.
  
     0.528
A0A072VNH3
ARM repeat kinase family protein.
  
     0.523
A0A072UHR5
WEB family plant protein.
  
     0.517
G7KX28_MEDTR
Putative WEB family protein.
  
     0.514
G7IC97_MEDTR
DUF1639 family protein.
  
     0.513
G7IDU0_MEDTR
Myb-CC type transfactor, lheqle motif protein.
  
     0.511
A0A072VK38
Ribosomal RNA processing brix domain protein.
  
     0.510
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.