STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072V237Putative phosphoric monoester hydrolase. (183 aa)    
Predicted Functional Partners:
A0A072TQ51
Putative proteasome component (PCI) domain-containing protein.
      
 0.690
A0A072TTK9
Putative alpha-glucan, water dikinase.
      
 0.690
G7L2F8_MEDTR
Putative proteasome component (PCI) domain-containing protein.
      
 0.690
G7L3W8_MEDTR
Phosphoadenosine phosphosulfate reductase family protein.
    
 
 0.689
A0A072VH72
N-acyl-L-amino-acid amidohydrolase.
      
 0.686
G7IBI0_MEDTR
Putative N-acyl-aliphatic-L-amino acid amidohydrolase.
      
 0.686
G7K8S5_MEDTR
N-acyl-L-amino-acid amidohydrolase.
      
 0.686
A0A072VAY8
NADPH-protochlorophyllide oxidoreductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide); Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily.
   
 
 0.608
A0A072VG20
UDP-D-glucose/UDP-D-galactose 4-epimerase.
      
 0.600
G7L9K1_MEDTR
UDP-D-glucose/UDP-D-galactose 4-epimerase.
      
 0.600
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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