STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072V3J1YacP-like NYN domain protein. (334 aa)    
Predicted Functional Partners:
G7IUJ7_MEDTR
Ribonuclease III domain protein.
  
  
 0.991
G7IC96_MEDTR
Putative cysteine--tRNA ligase.
  
  
 0.814
G7JAF7_MEDTR
Putative cysteine--tRNA ligase.
  
  
 0.814
G7KHW7_MEDTR
Cysteinyl-tRNA synthetase.
  
  
 0.814
A0A072UPJ3
Putative tRNA (Guanosine(18)-2'-O)-methyltransferase.
  
  
 0.672
G7JHW1_MEDTR
Putative tRNA (Guanosine(18)-2'-O)-methyltransferase.
  
  
 0.672
G7L451_MEDTR
Putative tRNA (Guanosine(18)-2'-O)-methyltransferase.
  
  
 0.672
G7L7F2_MEDTR
Putative 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase.
  
  
 0.672
G7LIJ4_MEDTR
Putative 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase.
  
  
 0.672
G7IRB7_MEDTR
RNA-binding S4 domain protein.
  
  
 0.523
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.