STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072V9B3Putative RecQ mediated genome instability protein. (437 aa)    
Predicted Functional Partners:
G7JBC7_MEDTR
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.983
A0A072UZI8
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.981
G7J1L2_MEDTR
Crossover junction endonuclease MUS81-like protein.
    
 0.978
A2Q1W0_MEDTR
Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase domain-containing protein.
    
 0.957
G7JYL5_MEDTR
Putative ERCC4 domain, RuvA domain 2, restriction endonuclease type II.
    
 0.957
G7JYM1_MEDTR
Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase domain-containing protein.
    
 0.957
A0A072TSR0
RecQ family ATP-dependent DNA helicase.
   
 0.950
G7I8P0_MEDTR
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.950
G7I9G1_MEDTR
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.950
G7IGG6_MEDTR
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.950
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.