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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VA73Serine kinase-like protein. (539 aa)    
Predicted Functional Partners:
A0A072U4G1
Putative transcription factor MYB-HB-like family.
    
   0.695
G7KDD4_MEDTR
Pre-mRNA splicing factor component protein.
    
   0.695
G7LAU9_MEDTR
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 
 0.622
A0A072TNI9
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 
 0.617
A0A072VJJ2
Putative nucleotide-binding alpha-beta plait domain-containing protein.
    
 
 0.617
G7IAR3_MEDTR
RNA-binding (RRM/RBD/RNP motif) family protein.
    
 
 0.617
G7KRX0_MEDTR
Phytochrome A-associated F-box protein, putative.
    
 
 0.617
G7JAD6_MEDTR
CC1-like splicing factor.
    
 
 0.453
G7K708_MEDTR
RNA recognition motif.
    
 
 0.453
G7LC87_MEDTR
CC1-like splicing factor.
    
 
 0.453
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.