STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VCU4Topless-like protein. (625 aa)    
Predicted Functional Partners:
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
   
 0.590
G7JRM6_MEDTR
Putative B30.2/SPRY domain, concanavalin A-like lectin/glucanase domain-containing protein.
    
 0.508
G7JAY0_MEDTR
Tyrosine kinase family protein.
    
 0.469
G7JAY4_MEDTR
Calcium-dependent kinase family protein; Belongs to the protein kinase superfamily.
    
 0.469
G7L8A5_MEDTR
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.454
A0A072VJ54
Transcriptional corepressor leunig-like protein.
  
   
 0.429
A0A072TNK1
Putative transcription factor C3H family.
  
 
  0.428
G7JV46_MEDTR
Beta-tubulin, putative.
   
 0.428
A0A072UXW2
Putative transcription factor WD40-like family; Belongs to the WD repeat SEC13 family.
    
 0.416
A0A072UYV5
WD domain, G-beta repeat protein.
  
   
 0.408
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.