STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VE13Fanconi anemia group J-like protein. (1224 aa)    
Predicted Functional Partners:
A0A072VFC7
DNA topoisomerase 2-binding-like protein.
   
 0.983
G7IDS4_MEDTR
DNA replication regulator dpb11, putative.
   
 0.983
G7KSM4_MEDTR
DNA topoisomerase 2-binding-like protein, putative.
   
 0.983
G7L5Y2_MEDTR
General transcription factor IIH subunit.
    
 0.973
G7J304_MEDTR
General transcription factor IIH subunit, putative.
    
 0.972
G7I853_MEDTR
Cyclin H, putative; Belongs to the cyclin family.
    
 0.969
G7IQL8_MEDTR
Putative tetratricopeptide-like helical domain, pentacotripeptide-repeat region of PROPR.
    
 0.967
G7J007_MEDTR
PPR containing plant-like protein.
    
 0.967
G7K5Y3_MEDTR
Putative transcription factor interactor and regulator FHA-SMAD family.
    
 0.965
G7LDX0_MEDTR
Transcription initiation factor IIE, putative.
   
 0.965
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (18%) [HD]