Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VFX0Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
G7IEC0_MEDTR
TIME FOR coffee-like protein, putative.
    
 0.824
G7ISE4_MEDTR
Putative transcription factor AP2-EREBP family.
  
 
   0.728
G7KNY7_MEDTR
Putative cGMP-dependent protein kinase AGC-PKA-PKG family.
    
 0.638
A0A072U3C1
Putative brevis radix (BRX) domain, transcription factor BREVIS RADIX domain-containing protein.
    
   0.596
G7K6V5_MEDTR
Brevis RADIX-like protein.
    
   0.596
A0A072UAE1
Myb-like DNA-binding domain, shaqkyf class protein.
    
 
 0.508
A0A072VWY9
Putative transcription factor WRKY family.
      
 0.503
G7JJ51_MEDTR
Carboxy-terminal domain phosphatase-like protein, putative.
      
 0.484
G7KSX8_MEDTR
Carboxy-terminal domain phosphatase-like protein, putative.
      
 0.484
A0A072ULN5
Putative signal-recognition-particle GTPase.
    
  0.475
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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