Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A072VGD0Receptor-like kinase. (796 aa)    
Predicted Functional Partners:
ZIP
ZIP metal ion transporter family protein.
      
 0.626
A0A072V956
Cell cycle switch protein CCS52a.
   
 0.625
G7KXI8_MEDTR
F-actin-capping protein subunit alpha; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.619
G7I4Z8_MEDTR
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.617
G7ID26_MEDTR
Lectin receptor kinase.
      
 0.607
G7IHG3_MEDTR
Putative ubiquitinyl hydrolase 1.
     
 0.605
G7ZVY8_MEDTR
Putative tetratricopeptide-like helical domain-containing protein.
     
 0.587
A0A072V812
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
      
 0.578
G7K532_MEDTR
Uncharacterized protein.
   
    0.570
ZIP1
ZIP zinc/iron transport family protein.
      
 0.564
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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