STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VGF6Putative transcription factor C2H2 family. (251 aa)    
Predicted Functional Partners:
A0A072VQK0
Wall-associated receptor kinase galacturonan-binding protein.
  
     0.497
Q2HUM6_MEDTR
DUF4228 domain protein.
  
     0.493
G7JUB6_MEDTR
DUF4228 domain protein.
  
     0.480
A0A072VR18
Putative heavy metal-associated domain, HMA.
  
     0.466
G7J8G5_MEDTR
Uncharacterized protein.
  
   
 0.458
A0A072UTQ1
Wall-associated receptor kinase galacturonan-binding protein.
  
     0.452
MTR_0003s0580
BPS1, putative.
  
     0.446
G7IKX8_MEDTR
Membrane protein type I, putative.
  
 
   0.445
A0A072VEI1
Wall-associated receptor kinase galacturonan-binding protein.
  
     0.442
A0A072VFW6
Wall-associated receptor kinase galacturonan-binding protein.
  
     0.440
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.