Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
A0A072VN46Cyclin-dependent kinase. (584 aa)    
Predicted Functional Partners:
G7I853_MEDTR
Cyclin H, putative; Belongs to the cyclin family.
    
 0.682
G7J900_MEDTR
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.676
A0A072VUE3
Putative homogentisate solanesyltransferase.
     
  0.655
Q2MGQ5_MEDTR
RPB3 DNA-directed RNA polymerase II subunit 3.
   
 
 0.620
A0A072UB06
Cyclin-dependent kinase; Belongs to the protein kinase superfamily.
    
 0.605
A0A072UWF7
Cyclin-dependent kinase; Belongs to the protein kinase superfamily.
    
 0.605
A0A072U2Q0
Cyclin-T1-like protein; Belongs to the cyclin family.
    
 0.599
A0A072UCV5
Cyclin T1, putative.
    
 0.599
G7IE07_MEDTR
Amino-terminal domain cyclin; Belongs to the cyclin family.
    
 0.599
G7ITD0_MEDTR
Putative cyclin; Belongs to the cyclin family.
    
 0.599
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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