Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A072VPD3Putative transcription factor bHLH family. (426 aa)    
Predicted Functional Partners:
G8A1V6_MEDTR
Basic helix loop helix (BHLH) DNA-binding family protein.
  
   
 0.622
A0A072V2E5
Transmembrane protein, putative.
      
 0.592
A0A072VMD0
Cryptochrome 2B apoprotein.
      
 0.573
G7I4R1_MEDTR
Putative deoxyribodipyrimidine photo-lyase.
      
 0.573
A0A072VMB0
Putative transcription factor bHLH family.
  
   
 0.519
G7K9H5_MEDTR
Putative outer membrane protein/outer membrane enzyme PagP, beta-barrel.
      
 0.507
G7ZVI4_MEDTR
Photosystem II oxygen-evolving enhancer protein.
      
 0.507
A0A072TNY8
Putative transcription factor bHLH family.
  
   
 0.505
G7J891_MEDTR
Growth-regulating factor.
  
   
 0.499
Q2HTJ8_MEDTR
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein.
  
     0.497
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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