STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A072VQS9ATP-dependent RNA helicase DHX36-like protein. (1248 aa)    
Predicted Functional Partners:
G7JRZ2_MEDTR
Extracellular calcium sensing receptor, putative.
    
 0.784
G7JT26_MEDTR
Extracellular calcium sensing receptor.
    
 0.784
G7JZX7_MEDTR
Putative clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.784
G7L437_MEDTR
Putative Sde2 domain-containing protein.
    
 0.780
B7FMB2_MEDTR
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.758
G7JT80_MEDTR
EndA/NucM family nuclease.
    
 0.758
A0A072V2B0
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.700
A0A072V427
Uncharacterized protein.
    
 0.700
G7IDG9_MEDTR
Uncharacterized protein.
    
 0.700
G7JQK3_MEDTR
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.700
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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