STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KH86_MEDTRZinc finger CCCH domain protein. (422 aa)    
Predicted Functional Partners:
G7I253_MEDTR
Putative ribonuclease PH, bacterial-type, exosome complex component Rrp43.
    
  0.579
G7LG90_MEDTR
D-aminoacyl-tRNA deacylase.
    
 0.544
A0A072U8J7
Putative 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase.
   
 0.500
G7LAR7_MEDTR
CCR4-NOT transcription complex protein, putative.
    
 
 0.430
G7L3K7_MEDTR
Exosome complex exonuclease RRP46.
    
  0.404
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.