STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7FH08_MEDTRPutative peptidase S24/S26A/S26B/S26C, peptidase S24/S26, beta-ribbon domain-containing protein. (205 aa)    
Predicted Functional Partners:
CYN
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.870
A0A072TSU0
Microsomal signal peptidase 12 kDa protein.
   
 0.770
G7JC07_MEDTR
Microsomal signal peptidase 12 kDa protein.
   
 0.770
A0A072UBU7
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
    
 0.696
G7IWJ5_MEDTR
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
    
 0.696
Q2HTM7_MEDTR
Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family.
    
 0.696
G7KV95_MEDTR
DNA ligase.
  
 
 0.656
G7LIE5_MEDTR
Ubiquitin-associated/TS-N domain protein, putative.
  
 
 0.654
G7KCS1_MEDTR
Ubiquitin-associated/TS-N domain protein, putative.
  
 
 0.646
G7KW32_MEDTR
Putative transcription factor WD40-like family.
     
 0.506
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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