STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IFL1_MEDTRSquamosa promoter-binding-like protein. (745 aa)    
Predicted Functional Partners:
B7FGV9_MEDTR
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
      
 0.516
ZIP
ZIP metal ion transporter family protein.
      
 0.487
G7L172_MEDTR
Putative transcription factor bZIP family.
      
 0.471
A0A072U5P8
Transmembrane protein, putative.
  
     0.468
B7FK30_MEDTR
DNA/RNA-binding protein Kin17, motif protein.
    
 
 0.463
G8A1A5_MEDTR
Putative cleavage/polyadenylation specificity factor, A subunit.
      
 0.463
G7LDV4_MEDTR
Putative ubiquitin-conjugating enzyme E2-binding protein.
  
     0.456
A0A072UMQ9
Putative transcription factor VOZ family.
  
     0.433
A0A072TMH7
Transmembrane protein, putative.
  
     0.429
A0A072VBF0
Transcription factor tfiiic, tau55-like protein, putative.
  
     0.425
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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