STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7IY86_MEDTRTranscriptional factor B3 family protein. (285 aa)    
Predicted Functional Partners:
G7ILU8_MEDTR
Ovate transcriptional repressor.
  
     0.529
G7L799_MEDTR
Putative transcription factor OFP family.
  
     0.522
G7J931_MEDTR
NAC transcription factor-like protein.
  
     0.521
G7K691_MEDTR
Putative transcription factor NAM family.
  
     0.520
G7ITL0_MEDTR
Putative BURP domain-containing protein.
  
     0.519
G7JCE0_MEDTR
Uncharacterized protein.
  
     0.515
G7IZ35_MEDTR
GRAS family transcription factor.
  
     0.502
G7K8M1_MEDTR
WRKY family transcription factor.
  
     0.498
G7JAI5_MEDTR
Auxin-induced protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.495
A0A072VCE5
GTP-binding protein Obg/CgtA protein.
  
     0.494
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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