STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7J3D1_MEDTRPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (380 aa)    
Predicted Functional Partners:
G7JC26_MEDTR
Ribosome silencing factor.
  
 
 0.852
G7L1T8_MEDTR
tRNA pseudouridine synthase.
    
 
 0.803
G7LIJ4_MEDTR
Putative 23S rRNA (Guanosine(2251)-2'-O)-methyltransferase.
  
 
 0.773
G7KTH2_MEDTR
P-loop nucleoside triphosphate hydrolase superfamily protein.
   
 
 0.744
G7K3V1_MEDTR
Putative ribosomal protein L29.
    
 
 0.735
G7L937_MEDTR
Ribosomal protein L51/S25/CI-B8 domain protein.
   
   0.719
A0A072UWG4
Putative GTP-binding protein EngA.
  
 
 0.660
A0A072V3J6
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 
 0.660
G8A389_MEDTR
Putative GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 
 0.660
A0A072VKA9
Putative ribosomal protein L11/L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.638
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.