STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7J3S2_MEDTRPutative DNA oxidative demethylase. (299 aa)    
Predicted Functional Partners:
A0A072UNB0
Plant-specific eukaryotic initiation factor 4B.
      
 0.517
G7KBH8_MEDTR
PLAC8 family protein.
  
     0.515
G7JU05_MEDTR
Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein.
  
     0.494
A0A072UES7
SKIP interacting protein.
  
     0.484
MTR_0172s0050
Cell number regulator-like protein.
  
     0.481
A0A072UG18
Putative GDP-fucose protein O-fucosyltransferase.
  
     0.478
I3SI25_MEDTR
Uncharacterized protein.
  
     0.476
I3SSC7_MEDTR
Outer envelope pore protein 16.
  
     0.476
A0A072TUS8
Viral movement protein.
  
     0.474
G7L2Q2_MEDTR
Kinase family protein.
  
     0.468
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.