STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JAF7_MEDTRPutative cysteine--tRNA ligase. (570 aa)    
Predicted Functional Partners:
A0A072UXB1
Putative translation elongation factor EF1B, gamma chain, S-crystallin.
   
 0.937
G7IUJ7_MEDTR
Ribonuclease III domain protein.
  
  
 0.937
G7KHW7_MEDTR
Cysteinyl-tRNA synthetase.
  
  
 
0.903
G7IC96_MEDTR
Putative cysteine--tRNA ligase.
  
  
 
0.902
A0A072UPQ8
Putative N-acetylglucosaminylphosphatidylinositol deacetylase.
  
 
 0.833
A0A072V3J1
YacP-like NYN domain protein.
  
  
 0.814
G7JNY9_MEDTR
Methionine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.767
G7JNZ1_MEDTR
Methionyl-tRNA synthetase, putative.
  
  
 0.767
G7JSP8_MEDTR
Methionine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.767
G7JJA8_MEDTR
Putative leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.731
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (12%) [HD]