STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JFH5_MEDTRAP2-like ethylene-responsive transcription factor. (359 aa)    
Predicted Functional Partners:
G7IEC0_MEDTR
TIME FOR coffee-like protein, putative.
    
 0.811
G7K7W1_MEDTR
Auxin responsive protein.
      
 0.591
G7I6B9_MEDTR
Putative gibberellin 3-beta-dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.502
G7IME6_MEDTR
Gibberellin 3-beta-dioxygenase 1; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.502
A0A072VE21
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
  
     0.471
RDN1
Hydroxyproline O-arabinosyltransferase RDN1; Probable glycosyltransferase involved in the O- arabinosylation of several proteins including extensins and small signaling peptides (Probable). Catalyzes the transfer of the initial L- arabinose to the hydroxyl group of Hyp residues (Probable). Probably involved in the arabinosylation of CLE12, a signaling peptide that moves from root to shoot, to interact with SUNN receptor kinase signaling that regulates nodulation (Probable). Involved in long distance nodulation signaling events (Probable). Involved in the autoregulation of nodulation (A [...]
  
     0.468
RDN2
Hydroxyproline O-arabinosyltransferase RDN2; Glycosyltransferase involved in the O-arabinosylation of several proteins including extensins and small signaling peptides (By similarity). Catalyzes the transfer of the initial L-arabinose to the hydroxyl group of Hyp residues (By similarity). Probably involved in the arabinosylation of CLAVATA3/ESR-related (CLE) signaling peptides that move from root to shoot, to interact with SUNN receptor kinase signaling that regulates nodulation (Probable). Involved in long distance nodulation signaling events. Involved in the autoregulation of nodulat [...]
  
     0.465
MTR_0530s0020
Clathrin assembly protein.
   
  
 0.427
A0A072TTL4
Clathrin assembly protein.
   
  
 0.427
A0A072VCX6
Transmembrane protein, putative.
  
     0.427
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.