STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JH62_MEDTR50S ribosomal protein L2. (382 aa)    
Predicted Functional Partners:
Q2HVM9_MEDTR
Ribosomal protein L20, bacterial and organelle form.
   
 
 0.942
MTR_0027s0250
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.935
G7L6M1_MEDTR
Putative ribosomal protein L5.
 
 0.931
A0A072UBA1
Shwachman-bodian-diamond syndrome protein, putative.
   
   0.920
MTR_0316s0010
50S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
 
 0.909
G7L0P4_MEDTR
Putative ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.892
G7LGD1_MEDTR
50S ribosomal protein L25, putative.
   
 
 0.889
B7FHF4_MEDTR
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.888
G7I920_MEDTR
Putative ribosomal protein L33.
  
 
 0.888
I3SA92_MEDTR
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.888
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.