STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JNW2_MEDTRPsbB mRNA maturation factor Mbb1. (670 aa)    
Predicted Functional Partners:
I3SN70_MEDTR
Photosystem I reaction center subunit III.
  
   0.767
B7FK10_MEDTR
RNA polymerase II accessory factor Cdc73p.
    
 0.730
CDC16
Putative 43kDa postsynaptic protein.
    
 0.726
I3SVT4_MEDTR
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.723
G7LGN7_MEDTR
Putative RNA polymerase II associated factor Paf1.
   
 0.720
G7JRT3_MEDTR
Putative transcription factor WD40-like family.
    
 0.719
G7K258_MEDTR
Putative anaphase-promoting complex subunit 1.
    
 0.719
G7K3C1_MEDTR
Putative tetratricopeptide-like helical domain, anaphase-promoting complex subunit 5.
   
 0.714
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
    
 0.670
G7IPZ9_MEDTR
Putative tetratricopeptide-like helical domain-containing protein.
    
 0.647
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.