Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A072UDU0 | A0A072W1Q3 | A0A072UDU0 | A0A072W1Q3 | Uncharacterized protein. | Nucleolar RNA-associated protein, putative. | 0.531 |
A0A072UDU0 | G7I5R4_MEDTR | A0A072UDU0 | G7I5R4 | Uncharacterized protein. | Viral A-type inclusion protein, putative. | 0.485 |
A0A072UDU0 | G7J9L8_MEDTR | A0A072UDU0 | G7J9L8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.530 |
A0A072UDU0 | G7JTN6_MEDTR | A0A072UDU0 | G7JTN6 | Uncharacterized protein. | Putative Homeobox domain-containing protein. | 0.498 |
A0A072UDU0 | G7K7F4_MEDTR | A0A072UDU0 | G7K7F4 | Uncharacterized protein. | Putative IQ motif, EF-hand binding protein. | 0.425 |
A0A072UDU0 | G7LCU2_MEDTR | A0A072UDU0 | G7LCU2 | Uncharacterized protein. | Uncharacterized protein. | 0.531 |
A0A072UJF9 | A0A072W1Q3 | A0A072UJF9 | A0A072W1Q3 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Nucleolar RNA-associated protein, putative. | 0.503 |
A0A072UJF9 | G7I5R4_MEDTR | A0A072UJF9 | G7I5R4 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Viral A-type inclusion protein, putative. | 0.520 |
A0A072UJF9 | G7IRJ2_MEDTR | A0A072UJF9 | G7IRJ2 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | 0.901 |
A0A072UJF9 | G7J9L8_MEDTR | A0A072UJF9 | G7J9L8 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.545 |
A0A072UJF9 | G7JTN6_MEDTR | A0A072UJF9 | G7JTN6 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Putative Homeobox domain-containing protein. | 0.510 |
A0A072UJF9 | G7JV59_MEDTR | A0A072UJF9 | G7JV59 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Putative pentatricopeptide. | 0.402 |
A0A072UJF9 | G7K7F4_MEDTR | A0A072UJF9 | G7K7F4 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Putative IQ motif, EF-hand binding protein. | 0.463 |
A0A072UJF9 | G7LCU2_MEDTR | A0A072UJF9 | G7LCU2 | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | Uncharacterized protein. | 0.546 |
A0A072W1Q3 | A0A072UDU0 | A0A072W1Q3 | A0A072UDU0 | Nucleolar RNA-associated protein, putative. | Uncharacterized protein. | 0.531 |
A0A072W1Q3 | A0A072UJF9 | A0A072W1Q3 | A0A072UJF9 | Nucleolar RNA-associated protein, putative. | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | 0.503 |
A0A072W1Q3 | G7I5R4_MEDTR | A0A072W1Q3 | G7I5R4 | Nucleolar RNA-associated protein, putative. | Viral A-type inclusion protein, putative. | 0.433 |
A0A072W1Q3 | G7IRJ2_MEDTR | A0A072W1Q3 | G7IRJ2 | Nucleolar RNA-associated protein, putative. | Putative histone-lysine N-methyltransferase chromatin remodeling SET family. | 0.500 |
A0A072W1Q3 | G7J9L8_MEDTR | A0A072W1Q3 | G7J9L8 | Nucleolar RNA-associated protein, putative. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.471 |
A0A072W1Q3 | G7JTN6_MEDTR | A0A072W1Q3 | G7JTN6 | Nucleolar RNA-associated protein, putative. | Putative Homeobox domain-containing protein. | 0.498 |
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