STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7JU57_MEDTRPutative Bile acid:sodium symporter/arsenical resistance protein Acr3. (410 aa)    
Predicted Functional Partners:
A0A072VNE2
Cystathionine beta-lyase/cystathionine gamma-synthase.
      
 0.596
G7J805_MEDTR
Cystathionine beta-lyase/cystathionine gamma-synthase.
      
 0.596
A0A072UPN1
Triose phosphate/phosphate translocator.
      
 0.508
G7JWT8_MEDTR
Putative triose phosphate/phosphoenolpyruvate translocator, sugar phosphate transporter.
      
 0.508
A0A072VAY5
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
   
 0.466
G7KFU3_MEDTR
Autophagy protein 5; Required for autophagy.
     
 0.436
A0A072TLU6
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.
     
 0.421
G7IED3_MEDTR
FZO-like protein.
   
 
 0.400
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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