STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K158_MEDTRCoatomer subunit beta-like protein, putative. (134 aa)    
Predicted Functional Partners:
G7JNY9_MEDTR
Methionine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.989
G7JNZ1_MEDTR
Methionyl-tRNA synthetase, putative.
  
 0.989
G7JSP8_MEDTR
Methionine-tRNA ligase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.989
G7ICA2_MEDTR
Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.953
G7JQP6_MEDTR
Putative isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.949
G7IAE3_MEDTR
Putative glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.924
A0A072V611
Putative isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.889
A0A072TKH0
Putative glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.809
A0A072TW15
Putative GMP synthase (Glutamine-hydrolyzing).
   
  
 0.801
G7IXY9_MEDTR
Prolyl-tRNA synthetase family protein.
  
 0.796
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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