STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7K5Z8_MEDTRPutative PB1 domain-containing protein. (383 aa)    
Predicted Functional Partners:
G7ISD5_MEDTR
Squamosa promoter-binding-like protein.
  
     0.519
I3SPP4_MEDTR
Squamosa promoter-binding-like protein.
  
     0.504
A0A072VA58
Squamosa promoter-binding-like protein.
  
     0.494
G7JGX3_MEDTR
Ubiquitin system component CUE protein.
  
     0.486
A0A072U475
Putative transcription factor B3-Domain family.
  
     0.480
A0A072TRQ4
Putative transcription factor SBP family.
  
     0.479
G7LGZ1_MEDTR
PHD6, putative.
  
     0.467
G7ZWP1_MEDTR
Putative histone acetyltransferase.
  
     0.465
G7LHF3_MEDTR
Alpha/beta amyrin synthase.
  
     0.463
A0A072VKM7
B3 DNA-binding domain protein.
  
     0.459
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.