STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KAQ1_MEDTRIntracellular protein transporter USO1-like protein. (657 aa)    
Predicted Functional Partners:
A0A072UQ33
Putative filament-like plant protein.
  
     0.523
G7K5B5_MEDTR
Putative filament-like plant protein.
  
     0.522
A0A072VNK6
Putative transcription factor NAM family.
  
     0.488
MTR_0092s0100
GRAS family transcription regulator; Belongs to the GRAS family.
  
     0.486
A0A072TXL6
Putative PWWP domain-containing protein.
  
     0.484
G7JV65_MEDTR
Transmembrane protein, putative.
  
     0.483
G7J7F4_MEDTR
Ribonuclease P protein subunit P38, related protein, putative.
  
     0.469
G7JLH7_MEDTR
Uncharacterized protein.
  
     0.468
A0A072TZD2
BHLH transcription factor.
  
     0.467
A0A072VSG5
COP1-interacting-like protein.
  
     0.465
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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