STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KD35_MEDTRUbiquitin carboxyl-terminal hydrolase, putative. (711 aa)    
Predicted Functional Partners:
A0A072V2A1
Ubiquitin-60S ribosomal L40 fusion protein.
    
 0.718
G7K1X6_MEDTR
Ubiquitin-60S ribosomal protein L40.
    
 0.718
A0A072VKZ6
E3 ubiquitin-protein ligase, putative.
   
 
 0.628
A0A072VW29
E3 ubiquitin-protein ligase.
   
 
 0.628
G7JNF2_MEDTR
Putative aminoacyltransferase, E1 ubiquitin-activating enzyme.
   
 
 0.628
G7L1Q3_MEDTR
E3 ubiquitin-protein ligase UPL3, putative.
   
 
 0.628
G7L4I6_MEDTR
E3 ubiquitin-protein ligase.
   
 
 0.628
G7L4Y3_MEDTR
HECT-domain (Ubiquitin-transferase) protein.
   
 
 0.628
A0A072TW15
Putative GMP synthase (Glutamine-hydrolyzing).
   
 
 0.627
A0A072U659
UV-stimulated scaffold A-like protein.
    
 0.625
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.