STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KM35_MEDTRC2H2-type zinc finger protein. (272 aa)    
Predicted Functional Partners:
G7JJ22_MEDTR
SNF2 family amino-terminal protein.
    
 0.559
A0A072UD47
Wall-associated receptor kinase galacturonan-binding protein.
  
 
  0.535
A0A072UMY2
Uncharacterized protein.
  
     0.511
A0A072TX19
Uncharacterized protein.
  
 
  0.506
A0A072UHL1
Uncharacterized protein.
  
 
  0.505
G7JAY0_MEDTR
Tyrosine kinase family protein.
   
 0.502
G7JAY4_MEDTR
Calcium-dependent kinase family protein; Belongs to the protein kinase superfamily.
   
 0.502
G7KNY7_MEDTR
Putative cGMP-dependent protein kinase AGC-PKA-PKG family.
    
 0.501
G7J0M5_MEDTR
Putative ribosomal protein S23/S29.
    
  0.496
G7KMM1_MEDTR
Uncharacterized protein.
    
  0.496
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.