STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7KMT1_MEDTRMembrane protein. (278 aa)    
Predicted Functional Partners:
A0A072UZ40
Putative ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
    0.757
A0A072VL84
50S ribosomal L9-like protein.
  
  
 0.757
B7FFD2_MEDTR
50S ribosomal protein L9.
  
  
 0.757
G7I5B0_MEDTR
Putative ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
    0.757
G7K9T6_MEDTR
50S ribosomal L9-like protein.
  
  
 0.757
G7I920_MEDTR
Putative ribosomal protein L33.
   
    0.729
A0A072VKA9
Putative ribosomal protein L11/L12; Belongs to the universal ribosomal protein uL11 family.
   
    0.708
B7FH91_MEDTR
Putative ribosomal protein L11/L12; Belongs to the universal ribosomal protein uL11 family.
   
    0.708
G7IRS3_MEDTR
Putative ribosomal protein L11/L12; Belongs to the universal ribosomal protein uL11 family.
   
    0.708
G7J7D8_MEDTR
Putative ribosomal protein L11/L12; Belongs to the universal ribosomal protein uL11 family.
   
    0.708
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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