STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7L217_MEDTRPutative K domain-containing protein. (571 aa)    
Predicted Functional Partners:
A0A072VCJ4
Nuclear cap-binding protein subunit 2.
    
 0.634
G7KX77_MEDTR
Putative nuclear cap-binding protein subunit 1.
   
 0.621
Q2HU21_MEDTR
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.519
G7LF25_MEDTR
RNA polymerase II, Rpb4, core protein.
    
  0.501
Q2MGQ5_MEDTR
RPB3 DNA-directed RNA polymerase II subunit 3.
   
 
  0.499
G7KG21_MEDTR
Putative Zinc finger, double-stranded RNA binding protein.
    
   0.456
G7J780_MEDTR
Transmembrane protein, putative.
      
 0.450
G7IIZ6_MEDTR
Putative transcription factor C3H family.
   
 0.435
MTR_0019s0160
Putative DNA-directed RNA polymerase.
   
 
  0.424
A2Q3E0_MEDTR
DNA-directed RNA polymerase, 14 to 18 kDa subunit.
   
 
  0.424
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.