STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7L9L8_MEDTRCationic amino acid transporter. (461 aa)    
Predicted Functional Partners:
MTR_0031s0060
Amino acid permease.
  
 
 
 0.768
G7JC64_MEDTR
Putative amino acid/polyamine transporter I.
      
 0.682
G7K4C2_MEDTR
Pirin.
      
 0.592
A0A072TV27
Cationic amino acid transporter.
  
     0.544
I3SQF1_MEDTR
Photosystem I reaction center subunit X psaK.
      
 0.502
A0A072U0B4
PAR1 protein.
    
 0.411
A0A072UA78
PAR1 protein.
    
 0.411
A0A072UB52
PAR1 protein.
    
 0.411
G7IAN1_MEDTR
PAR1 protein.
    
 0.411
G7JR78_MEDTR
PAR1 protein.
    
 0.411
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.