STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G7LAD2_MEDTRPutative ribonuclease H-like domain-containing protein. (281 aa)    
Predicted Functional Partners:
G7IAT2_MEDTR
Putative ribose-5-phosphate isomerase.
  
 0.727
G7IMN1_MEDTR
Putative ribose-5-phosphate isomerase.
  
 0.727
G7L1U4_MEDTR
Putative ribose-5-phosphate isomerase.
  
 0.727
A0A072TTX3
Transaldolase family protein.
  
 0.671
G7JK42_MEDTR
Transaldolase total2 protein.
  
 0.671
G7KXR2_MEDTR
Transaldolase family protein.
  
 0.671
A0A072TUR1
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.666
A0A072TX81
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 0.666
G7ZV04_MEDTR
Decarboxylating 6-phosphogluconate dehydrogenase.
   
 0.666
G7L0V5_MEDTR
DNA-damage-repair/toleration protein DRT102.
  
 
 0.660
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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