STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q1SL04_MEDTRPutative small GTPase superfamily, P-loop containing nucleoside triphosphate hydrolase. (203 aa)    
Predicted Functional Partners:
A0A072UEM3
Trafficking protein particle complex protein.
    
 0.798
A2Q3F3_MEDTR
Trafficking protein particle complex subunit-like protein.
    
 0.795
B7FMS6_MEDTR
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.791
G7JCQ0_MEDTR
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.711
G7L8T3_MEDTR
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.711
A0A072UG57
Coiled-coil vesicle tethering-like protein, putative.
   
 0.710
A0A072UWN8
3-oxo-delta(4,5)-steroid 5-beta-reductase-like protein.
    
 
 0.710
B7FHC8_MEDTR
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.708
G7LGH7_MEDTR
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.708
G7J0E0_MEDTR
Photosystem I reaction center subunit V.
   
 
 0.689
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.