STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2HW18_MEDTRPutative rmlC-like jelly roll protein. (464 aa)    
Predicted Functional Partners:
G7JSZ9_MEDTR
Kinase superfamily protein, putative.
  
 
  0.516
A0A072UF38
Helix loop helix DNA-binding domain protein.
  
 
   0.514
G7I6T5_MEDTR
Salt stress response/antifungal domain protein.
  
 
   0.459
G7IC29_MEDTR
Uncharacterized protein.
  
 
  0.458
G7L8W1_MEDTR
Putative 11-S seed storage protein, plant.
  
   
 0.458
G7L8V9_MEDTR
Putative 11-S seed storage protein, plant.
  
   
 0.451
G7JXL3_MEDTR
Nutrient reservoir protein, putative.
  
 
   0.449
G7KMD5_MEDTR
Salt stress response/antifungal domain protein.
  
 
  0.447
G7JME7_MEDTR
Cyclin-dependent kinase inhibitor family protein.
  
     0.446
G7JZ01_MEDTR
Transmembrane protein, putative.
  
 
   0.439
Your Current Organism:
Medicago truncatula
NCBI taxonomy Id: 3880
Other names: M. truncatula, Medicago truncatula Gaertn., barrel medic
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