STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM58858.1Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (241 aa)    
Predicted Functional Partners:
SHN07097.1
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
 0.994
SHM58829.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.988
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
 0.978
SHM58804.1
uroporphyrin-III C-methyltransferase.
 
  
 0.882
SHN07113.1
Sulfate adenylyltransferase subunit 2.
 
  
 0.857
SHM58766.1
Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
  
 0.795
SHN14894.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.770
SHN31385.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.742
SHN12735.1
Hydroxyacylglutathione hydrolase.
    
 0.714
SHN31392.1
Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein.
  
 
 0.709
Your Current Organism:
Cyclobacterium lianum
NCBI taxonomy Id: 388280
Other names: C. lianum, CGMCC 1.6102, Cyclobacterium lianum Ying et al. 2006, JCM 14011, strain HY9
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